Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SORL1 ENSBTAG00000014611

.

Description

sortilin related receptor 1 [Source:VGNC Symbol;Acc:VGNC:35132]

Location

Primary_assembly 15: 32,048,184-32,220,026 forward strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110788.2	SORL1-203	10716	2240aa	ENSBTAP00000094629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TD06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000070310.2	SORL1-205	10666	2157aa	ENSBTAP00000069045.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MEV7	-
ENSBTAT00000019457.8	SORL1-204	10643	2128aa	ENSBTAP00000019457.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPZ1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000084029.2	SORL1-201	10426	2122aa	ENSBTAP00000061161.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMP0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000072824.3	SORL1-202	7545	2140aa	ENSBTAP00000074100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIG6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.