Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLEC7A ENSBTAG00000014546

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Description

C-type lectin domain containing 7A [Source:VGNC Symbol;Acc:VGNC:58597]

Location

Primary_assembly 5: 99,814,293-99,855,055 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000085840.2	CLEC7A-202	1780	281aa	ENSBTAP00000065065.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M4D3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000019330.6	CLEC7A-204	1390	201aa	ENSBTAP00000019330.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N2F4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000096632.1	CLEC7A-205	1242	168aa	ENSBTAP00000093365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9Q3	-
ENSBTAT00000019331.6	CLEC7A-201	871	224aa	ENSBTAP00000019331.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N2F3	-
ENSBTAT00000079012.3	CLEC7A-203	289	77aa	ENSBTAP00000057657.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLK8	-

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Summary

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