Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDGFA ENSBTAG00000014541

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Description

platelet derived growth factor subunit A [Source:VGNC Symbol;Acc:VGNC:32689]

Location

Primary_assembly 25: 42,011,395-42,031,474 forward strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 7 transcripts (splice variants), 263 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118301.2	PDGFA-204	2271	510aa	ENSBTAP00000076527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000107752.2	PDGFA-202	2667	214aa	ENSBTAP00000080201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4T8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000073586.3	PDGFA-206	2485	201aa	ENSBTAP00000073627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NM64	-
ENSBTAT00000019323.8	PDGFA-207	2440	202aa	ENSBTAP00000019323.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z0H2	-
ENSBTAT00000115824.2	PDGFA-203	2423	196aa	ENSBTAP00000097672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9THE7	-
ENSBTAT00000121261.2	PDGFA-201	1550	199aa	ENSBTAP00000090084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0M6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000139402.1	PDGFA-205	1457	295aa	ENSBTAP00000104068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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