Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SFXN1 ENSBTAG00000014536

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Description

sideroflexin 1 [Source:VGNC Symbol;Acc:VGNC:34530]

Location

Primary_assembly 10: 5,613,866-5,675,129 reverse strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000131082.1	SFXN1-203	2772	341aa	ENSBTAP00000101861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TTA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000019322.6	SFXN1-202	2542	318aa	ENSBTAP00000019322.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z038	-
ENSBTAT00000069486.2	SFXN1-201	2492	338aa	ENSBTAP00000068533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NB55	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000151353.1	SFXN1-205	1030	290aa	ENSBTAP00000105453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000083548.2	SFXN1-204	978	295aa	ENSBTAP00000066005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N6D4	-

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Summary

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