Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: CEP43 ENSBTAG00000014495

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Description

centrosomal protein 43 [Source:VGNC Symbol;Acc:VGNC:28985]

Gene Synonyms

FGFR1OP

Location

Primary_assembly 9: 101,818,090-101,846,458 forward strand.

ARS-UCD2.0:CM008176.2

About this gene

This gene has 7 transcripts (splice variants) and 194 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019271.8	CEP43-204	3391	399aa	ENSBTAP00000019271.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N1J5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000086315.3	CEP43-201	3375	379aa	ENSBTAP00000058303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMZ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000118608.2	CEP43-205	3322	376aa	ENSBTAP00000095417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGS9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000121779.2	CEP43-202	3294	352aa	ENSBTAP00000095044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAM1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000135112.2	CEP43-206	3109	305aa	ENSBTAP00000083651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SE23	-
ENSBTAT00000097472.2	CEP43-203	3012	258aa	ENSBTAP00000083487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SBM1	-
ENSBTAT00000123121.2	CEP43-207	2898	240aa	ENSBTAP00000086937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SKR3	-

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Summary

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