Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SDC2 ENSBTAG00000014357

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Description

syndecan 2 [Source:VGNC Symbol;Acc:VGNC:34379]

Location

Primary_assembly 14: 67,588,244-67,708,225 reverse strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 9 transcripts (splice variants), 274 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000069051.2	SDC2-209	1563	496aa	ENSBTAP00000071799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQ12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000019090.7	SDC2-208	1132	202aa	ENSBTAP00000019090.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58DD4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000098548.1	SDC2-204	1060	200aa	ENSBTAP00000090637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SVX8	-
ENSBTAT00000113200.1	SDC2-206	1003	225aa	ENSBTAP00000099748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQZ2	-
ENSBTAT00000084329.3	SDC2-202	853	193aa	ENSBTAP00000071416.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKJ8	-
ENSBTAT00000072257.3	SDC2-201	841	189aa	ENSBTAP00000062912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3X3	-
ENSBTAT00000114188.1	SDC2-207	836	194aa	ENSBTAP00000095080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAQ5	-
ENSBTAT00000114126.1	SDC2-203	826	184aa	ENSBTAP00000093376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T949	-
ENSBTAT00000114050.1	SDC2-205	767	189aa	ENSBTAP00000101894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TU45	-

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Summary

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