Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATL1 ENSBTAG00000014312

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Description

atlastin GTPase 1 [Source:VGNC Symbol;Acc:VGNC:26265]

Location

Primary_assembly 10: 43,438,303-43,522,945 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 4 transcripts (splice variants), 216 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019032.6	ATL1-202	2722	558aa	ENSBTAP00000019032.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58D72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000103130.2	ATL1-201	2776	553aa	ENSBTAP00000084701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SP82	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000086940.3	ATL1-203	2431	550aa	ENSBTAP00000070764.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NG58	-
ENSBTAT00000124527.2	ATL1-204	2359	548aa	ENSBTAP00000091315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXW4	-

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Summary

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