Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VRK1 ENSBTAG00000014230

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Description

VRK serine/threonine kinase 1 [Source:VGNC Symbol;Acc:VGNC:36834]

Location

Primary_assembly 21: 61,641,864-61,726,390 forward strand.

ARS-UCD2.0:CM008188.2

About this gene

This gene has 6 transcripts (splice variants), 291 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078182.3	VRK1-201	5710	435aa	ENSBTAP00000074019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7AS54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000101021.2	VRK1-202	5930	408aa	ENSBTAP00000084673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SL88	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000018916.8	VRK1-206	5715	408aa	ENSBTAP00000018916.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YZT1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000087026.3	VRK1-205	1547	415aa	ENSBTAP00000066956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N7W2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000095597.2	VRK1-204	1515	416aa	ENSBTAP00000084339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SDX6	-
ENSBTAT00000109647.2	VRK1-203	1062	264aa	ENSBTAP00000097071.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJH1	-

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Summary

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