Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
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Gene: FAAP20 ENSBTAG00000014136

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Description

FA core complex associated protein 20 [Source:VGNC Symbol;Acc:VGNC:112694]

Location

Primary_assembly 16: 50,589,838-50,598,403 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 2 transcripts (splice variants) and 72 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000018787.7	FAAP20-202	1346	280aa	ENSBTAP00000018787.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000093919.1	FAAP20-201	1657	216aa	ENSBTAP00000092615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T796	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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