Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALD1 ENSBTAG00000013953

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Description

caldesmon 1 [Source:VGNC Symbol;Acc:VGNC:26706]

Location

Primary_assembly 4: 98,475,945-98,681,118 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 5 transcripts (splice variants), 237 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000122708.2	CALD1-201	5114	790aa	ENSBTAP00000101112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000018566.7	CALD1-202	4797	752aa	ENSBTAP00000018566.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLW0	-
ENSBTAT00000107537.2	CALD1-204	4206	556aa	ENSBTAP00000085572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRG9	-
ENSBTAT00000105810.2	CALD1-203	4206	536aa	ENSBTAP00000089677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZX5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000079458.1	CALD1-205	1671	556aa	ENSBTAP00000058613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTX4	-

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Summary

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