Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A3 ENSBTAG00000030190

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Description

collagen type VI alpha 3 chain [Source:VGNC Symbol;Acc:VGNC:27572]

Location

Primary_assembly 3: 116,781,705-116,872,795 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 4 transcripts (splice variants), 368 orthologues, 13 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000018479.7	COL6A3-202	10420	3132aa	ENSBTAP00000018479.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BB91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000118734.1	COL6A3-201	10260	3061aa	ENSBTAP00000094962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAB4	-
ENSBTAT00000128902.1	COL6A3-204	10151	3025aa	ENSBTAP00000091095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T393	-
ENSBTAT00000132038.1	COL6A3-203	10117	3031aa	ENSBTAP00000090354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SV57	-

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Summary

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