Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRN ENSBTAG00000013798

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Description

protein tyrosine phosphatase receptor type N [Source:VGNC Symbol;Acc:VGNC:33554]

Location

Primary_assembly 2: 107,236,824-107,256,178 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 3 transcripts (splice variants), 256 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000018336.4	PTPRN-202	3567	979aa	ENSBTAP00000018336.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P56722	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000082545.2	PTPRN-203	3480	950aa	ENSBTAP00000065346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LX78	-
ENSBTAT00000087776.1	PTPRN-201	3444	955aa	ENSBTAP00000101586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TY50	-

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Summary

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