Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GPC1 ENSBTAG00000015996

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Description

glypican 1 [Source:VGNC Symbol;Acc:VGNC:29523]

Location

Primary_assembly 3: 119,863,688-119,891,434 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 4 transcripts (splice variants), 271 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082766.2	GPC1-204	3448	602aa	ENSBTAP00000060932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZ29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000018329.8	GPC1-201	3337	559aa	ENSBTAP00000018329.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIL6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000146343.1	GPC1-203	3251	507aa	ENSBTAP00000106278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000080961.2	GPC1-202	3136	523aa	ENSBTAP00000070339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NF78	-

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Summary

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