Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HSPA12A ENSBTAG00000013779

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Description

heat shock protein family A (Hsp70) member 12A [Source:VGNC Symbol;Acc:VGNC:55956]

Location

Primary_assembly 26: 37,070,660-37,241,340 reverse strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000112323.1	HSPA12A-204	2375	692aa	ENSBTAP00000075888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000018304.6	HSPA12A-201	3235	672aa	ENSBTAP00000018304.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MJ70	-
ENSBTAT00000082330.2	HSPA12A-202	3215	676aa	ENSBTAP00000063437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M166	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000095024.1	HSPA12A-203	3128	647aa	ENSBTAP00000102610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U0K2	-

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Summary

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