Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SKP2 ENSBTAG00000013562

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Description

S-phase kinase associated protein 2 [Source:VGNC Symbol;Acc:VGNC:112713]

Location

Primary_assembly 20: 38,040,008-38,088,539 reverse strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 9 transcripts (splice variants), 243 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094776.1	SKP2-202	2302	451aa	ENSBTAP00000103527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TYW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000114830.1	SKP2-203	2299	438aa	ENSBTAP00000097607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKY0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000018036.7	SKP2-204	2257	436aa	ENSBTAP00000018036.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RNT1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000093858.1	SKP2-201	2160	423aa	ENSBTAP00000090698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T2M6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000115050.1	SKP2-205	2122	379aa	ENSBTAP00000086650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMW2	-
ENSBTAT00000128236.1	SKP2-206	1636	217aa	ENSBTAP00000097549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TG62	-
ENSBTAT00000131544.1	SKP2-208	1408	408aa	ENSBTAP00000084424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SE65	-
ENSBTAT00000110928.1	SKP2-207	1318	378aa	ENSBTAP00000082827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SBQ5	-
ENSBTAT00000094824.1	SKP2-209	1261	358aa	ENSBTAP00000086911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNJ9	-

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Summary

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