Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: L1CAM ENSBTAG00000013462

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Description

L1 cell adhesion molecule [Source:VGNC Symbol;Acc:VGNC:30760]

Location

Primary_assembly X: 37,076,263-37,099,808 reverse strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 5 transcripts (splice variants), 243 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071285.2	L1CAM-202	5376	1391aa	ENSBTAP00000072651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MLS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000017906.7	L1CAM-201	5124	1257aa	ENSBTAP00000017906.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BBI3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000068733.2	L1CAM-205	4992	1248aa	ENSBTAP00000068948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NC56	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000070235.2	L1CAM-203	4934	1227aa	ENSBTAP00000059479.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVV0	-
ENSBTAT00000087852.1	L1CAM-204	4655	1134aa	ENSBTAP00000101035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRN1	-

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Summary

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