Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
Regulation
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ID History
- Gene history

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Gene: HTATIP2 ENSBTAG00000013419

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Description

HIV-1 Tat interactive protein 2 [Source:VGNC Symbol;Acc:VGNC:29989]

Location

Primary_assembly 29: 24,565,833-24,611,483 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 4 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097780.1	HTATIP2-203	2102	315aa	ENSBTAP00000090878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000135122.1	HTATIP2-204	1838	287aa	ENSBTAP00000087487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQ38	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000017856.5	HTATIP2-201	1618	279aa	ENSBTAP00000017856.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLP7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000107104.1	HTATIP2-202	1480	196aa	ENSBTAP00000084192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SDH7	-

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Summary

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