Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDKAL1 ENSBTAG00000025589

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Description

CDK5 regulatory subunit associated protein 1 like 1 [Source:VGNC Symbol;Acc:VGNC:27137]

Location

Primary_assembly 23: 36,828,497-37,444,772 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000081080.2	CDKAL1-204	2046	630aa	ENSBTAP00000070774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJ38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000085285.2	CDKAL1-201	2581	594aa	ENSBTAP00000062862.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3S9	-
ENSBTAT00000017811.7	CDKAL1-202	2533	578aa	ENSBTAP00000017811.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAW5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000096163.1	CDKAL1-203	2470	557aa	ENSBTAP00000101254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXA1	-

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Summary

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