Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOMER1 ENSBTAG00000025853

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Description

homer scaffold protein 1 [Source:VGNC Symbol;Acc:VGNC:29901]

Location

Primary_assembly 10: 10,413,731-10,546,778 reverse strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 6 transcripts (splice variants), 267 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082088.2	HOMER1-202	2905	362aa	ENSBTAP00000057679.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLM3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000017647.5	HOMER1-203	3087	359aa	ENSBTAP00000017647.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YYV2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000097435.1	HOMER1-204	2979	323aa	ENSBTAP00000074800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSW9	-
ENSBTAT00000087541.1	HOMER1-205	2682	224aa	ENSBTAP00000093109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5K9	-
ENSBTAT00000098227.1	HOMER1-201	2160	180aa	ENSBTAP00000086727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SUD0	-
ENSBTAT00000073221.2	HOMER1-206	924	177aa	ENSBTAP00000068496.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDK0	-

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Summary

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