Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP13A3 ENSBTAG00000013204

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Description

ATPase 13A3 [Source:VGNC Symbol;Acc:VGNC:26279]

Location

Primary_assembly 1: 73,048,449-73,125,558 forward strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 3 transcripts (splice variants), 290 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000017579.7	ATP13A3-203	5000	1256aa	ENSBTAP00000017579.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BG26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000079971.3	ATP13A3-201	5127	1226aa	ENSBTAP00000065678.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5T0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077077.3	ATP13A3-202	5046	1199aa	ENSBTAP00000069740.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NDX5	-

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Summary

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