Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AGRN ENSBTAG00000013191

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Description

agrin [Source:VGNC Symbol;Acc:VGNC:25742]

Location

Primary_assembly 16: 51,422,882-51,462,010 reverse strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 6 transcripts (splice variants), 193 orthologues, 28 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000085269.2	AGRN-203	7407	2068aa	ENSBTAP00000060572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000017563.6	AGRN-204	7389	2062aa	ENSBTAP00000017563.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSI2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000114034.1	AGRN-202	7313	2047aa	ENSBTAP00000101083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TR62	-
ENSBTAT00000072720.2	AGRN-205	7140	1979aa	ENSBTAP00000061060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000082453.2	AGRN-206	7113	1970aa	ENSBTAP00000065620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5N3	-
ENSBTAT00000075200.2	AGRN-201	6653	1883aa	ENSBTAP00000068647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDW2	-

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Summary

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