Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHF11 ENSBTAG00000013159

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Description

PHD finger protein 11 [Source:VGNC Symbol;Acc:VGNC:106864]

Location

Primary_assembly 12: 19,055,528-19,089,521 forward strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 5 transcripts (splice variants), 136 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000152214.1	PHF11-204	1933	432aa	ENSBTAP00000106378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000084783.3	PHF11-201	2037	415aa	ENSBTAP00000056876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPL5	-
ENSBTAT00000082532.3	PHF11-203	1812	398aa	ENSBTAP00000060380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXV2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000080329.3	PHF11-205	1745	372aa	ENSBTAP00000069553.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MK27	-
ENSBTAT00000017493.5	PHF11-202	1745	313aa	ENSBTAP00000017493.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YYN7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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