Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TDP1 ENSBTAG00000013138

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Description

tyrosyl-DNA phosphodiesterase 1 [Source:VGNC Symbol;Acc:VGNC:35713]

Location

Primary_assembly 10: 101,636,063-101,708,726 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 6 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000105216.2	TDP1-201	2257	659aa	ENSBTAP00000091018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000126154.2	TDP1-202	3004	574aa	ENSBTAP00000087168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSR5	-
ENSBTAT00000017463.8	TDP1-205	2409	628aa	ENSBTAP00000017463.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MST1	-
ENSBTAT00000134536.1	TDP1-206	2206	647aa	ENSBTAP00000076535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S356	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000128368.2	TDP1-203	2043	555aa	ENSBTAP00000092874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T7W1	-
ENSBTAT00000134384.2	TDP1-204	2024	581aa	ENSBTAP00000077357.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S122	-

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Summary

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