Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRUNE2 ENSBTAG00000012991

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Description

prune homolog 2 with BCH domain [Source:VGNC Symbol;Acc:VGNC:33429]

Location

Primary_assembly 8: 52,676,322-52,887,154 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 6 transcripts (splice variants), 230 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000123281.1	PRUNE2-205	9036	2810aa	ENSBTAP00000102190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000102535.2	PRUNE2-202	9734	2806aa	ENSBTAP00000086478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SR02	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000112334.2	PRUNE2-203	9731	2805aa	ENSBTAP00000081938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHG8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000107926.2	PRUNE2-204	9692	2792aa	ENSBTAP00000094141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T855	-
ENSBTAT00000127842.1	PRUNE2-201	9582	2793aa	ENSBTAP00000075817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSW3	-
ENSBTAT00000017205.7	PRUNE2-206	8715	2798aa	ENSBTAP00000017205.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFL0	-

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Summary

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