Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Phenotypes
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ID History
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Gene: IFT46 ENSBTAG00000012941

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Description

intraflagellar transport 46 [Source:VGNC Symbol;Acc:VGNC:30069]

Location

Primary_assembly 15: 29,204,446-29,219,600 reverse strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 3 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000017195.5	IFT46-202	1404	338aa	ENSBTAP00000017195.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YYD2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000094547.1	IFT46-201	2102	289aa	ENSBTAP00000085023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SM61	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000112277.1	IFT46-203	843	280aa	ENSBTAP00000093815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAY1	-

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Summary

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