Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: EXOSC1 ENSBTAG00000012699

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Description

exosome component 1 [Source:VGNC Symbol;Acc:VGNC:28655]

Location

Primary_assembly 26: 18,657,377-18,664,361 reverse strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 4 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000128451.1	EXOSC1-201	1237	248aa	ENSBTAP00000091491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T6S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000128007.1	EXOSC1-202	1186	231aa	ENSBTAP00000077191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXF6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000016879.7	EXOSC1-203	820	170aa	ENSBTAP00000016879.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PSZ8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000081396.2	EXOSC1-204	442	140aa	ENSBTAP00000066143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBR9	-

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Summary

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