Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FMR1 ENSBTAG00000012552

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Description

Fragile X messenger ribonucleoprotein 1 [Source:VGNC Symbol;Acc:VGNC:29055]

Location

Primary_assembly X: 30,624,825-30,664,682 forward strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 7 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074884.2	FMR1-202	4021	820aa	ENSBTAP00000063709.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000121318.1	FMR1-204	3227	556aa	ENSBTAP00000074773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSU8	-
ENSBTAT00000016665.8	FMR1-201	3127	799aa	ENSBTAP00000016665.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MXQ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000073017.3	FMR1-205	2474	570aa	ENSBTAP00000058546.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTS1	-
ENSBTAT00000124465.2	FMR1-206	1972	417aa	ENSBTAP00000088893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZT5	-
ENSBTAT00000122991.2	FMR1-207	1857	549aa	ENSBTAP00000075973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXV6	-
ENSBTAT00000121479.2	FMR1-203	1156	297aa	ENSBTAP00000091539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T4E9	-

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Summary

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