Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: POLR1E ENSBTAG00000012243

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Description

RNA polymerase I subunit E [Source:VGNC Symbol;Acc:VGNC:33134]

Location

Primary_assembly 8: 61,610,300-61,673,349 forward strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 6 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000016250.6	POLR1E-201	4818	419aa	ENSBTAP00000016250.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SZ29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000105461.2	POLR1E-206	4903	407aa	ENSBTAP00000090845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T2Z3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000120688.2	POLR1E-203	1509	387aa	ENSBTAP00000087075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNX9	-
ENSBTAT00000125291.2	POLR1E-204	1320	390aa	ENSBTAP00000098345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TPP4	-
ENSBTAT00000115686.2	POLR1E-205	1305	395aa	ENSBTAP00000080812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SA70	-
ENSBTAT00000122197.2	POLR1E-202	1267	396aa	ENSBTAP00000078933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6M3	-

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Summary

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