Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CD22 ENSBTAG00000011887

.

Description

CD22 molecule [Source:VGNC Symbol;Acc:VGNC:27012]

Location

Primary_assembly 18: 46,035,918-46,049,443 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 6 transcripts (splice variants), 1356 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000081458.3	CD22-204	3780	928aa	ENSBTAP00000071682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NI55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000015781.8	CD22-201	3521	884aa	ENSBTAP00000015781.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFW5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000145970.1	CD22-202	3388	844aa	ENSBTAP00000107366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000147728.1	CD22-203	3385	843aa	ENSBTAP00000107045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000147277.1	CD22-205	3275	826aa	ENSBTAP00000105801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000149157.1	CD22-206	2547	848aa	ENSBTAP00000107526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.