Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Gene: CFAP161 ENSBTAG00000011861

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Description

cilia and flagella associated protein 161 [Source:VGNC Symbol;Acc:VGNC:27239]

Location

Primary_assembly 21: 26,911,405-26,962,993 forward strand.

ARS-UCD2.0:CM008188.2

About this gene

This gene has 3 transcripts (splice variants) and 195 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000015744.6	CFAP161-203	1323	321aa	ENSBTAP00000015744.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RJC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000081023.3	CFAP161-201	1484	317aa	ENSBTAP00000071179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIQ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077238.3	CFAP161-202	1178	268aa	ENSBTAP00000062017.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXS2 Q32LB8	-

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Summary

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