Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TCTN3 ENSBTAG00000011841

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Description

tectonic family member 3 [Source:VGNC Symbol;Acc:VGNC:35710]

Location

Primary_assembly 26: 17,134,121-17,156,288 reverse strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 5 transcripts (splice variants), 180 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000091191.1	TCTN3-201	3000	599aa	ENSBTAP00000102365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000102281.1	TCTN3-202	2210	553aa	ENSBTAP00000093323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3F3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000120000.1	TCTN3-203	1898	551aa	ENSBTAP00000084544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SEI7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077029.2	TCTN3-204	1891	555aa	ENSBTAP00000069167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJ03	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000015714.7	TCTN3-205	1826	555aa	ENSBTAP00000015714.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGZ2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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