Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGCS1 ENSBTAG00000011839

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Description

3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:VGNC Symbol;Acc:VGNC:29880]

Location

Primary_assembly 20: 31,431,059-31,456,871 forward strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000015713.5	HMGCS1-203	4935	571aa	ENSBTAP00000015713.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RJG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000085392.3	HMGCS1-201	5122	547aa	ENSBTAP00000057020.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPX4	-
ENSBTAT00000152898.1	HMGCS1-202	4959	520aa	ENSBTAP00000107326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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