Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAB11FIP1 ENSBTAG00000011684

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Description

RAB11 family interacting protein 1 [Source:VGNC Symbol;Acc:VGNC:33616]

Location

Primary_assembly 27: 33,119,239-33,152,033 reverse strand.

ARS-UCD2.0:CM008194.2

About this gene

This gene has 3 transcripts (splice variants), 165 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000015513.5	RAB11FIP1-202	4606	1220aa	ENSBTAP00000015513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BKQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000069249.2	RAB11FIP1-203	2878	644aa	ENSBTAP00000063054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N1R3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000100682.1	RAB11FIP1-201	2603	521aa	ENSBTAP00000082550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJ12	-

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Summary

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