Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF6 ENSBTAG00000011656

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Description

pre-mRNA processing factor 6 [Source:VGNC Symbol;Acc:VGNC:33382]

Location

Primary_assembly 13: 53,834,521-53,871,497 reverse strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000096097.1	PRPF6-201	3272	1044aa	ENSBTAP00000078559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S435	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000120715.1	PRPF6-204	3648	849aa	ENSBTAP00000100074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TU46	-
ENSBTAT00000015480.4	PRPF6-202	2973	934aa	ENSBTAP00000015480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJ90	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000081159.2	PRPF6-203	2847	913aa	ENSBTAP00000074220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7ASU1	-

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Summary

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