Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RARB ENSBTAG00000011518

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Description

retinoic acid receptor beta [Source:VGNC Symbol;Acc:VGNC:58402]

Location

Primary_assembly 27: 40,196,882-40,645,068 reverse strand.

ARS-UCD2.0:CM008194.2

About this gene

This gene has 5 transcripts (splice variants), 450 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000131392.1	RARB-202	2568	455aa	ENSBTAP00000091230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000090453.1	RARB-201	2547	448aa	ENSBTAP00000086624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMT7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000145484.1	RARB-204	1141	201aa	ENSBTAP00000107316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000125251.2	RARB-205	1016	215aa	ENSBTAP00000076401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RVN4	-
ENSBTAT00000015305.7	RARB-203	1000	266aa	ENSBTAP00000015305.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3X6X1	-

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Summary

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