Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CLASP2 ENSBTAG00000011333

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Description

cytoplasmic linker associated protein 2 [Source:VGNC Symbol;Acc:VGNC:27390]

Location

Primary_assembly 22: 7,733,640-7,909,236 reverse strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 7 transcripts (splice variants), 223 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000095192.1	CLASP2-203	7209	1509aa	ENSBTAP00000081200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000124954.1	CLASP2-204	7182	1500aa	ENSBTAP00000099547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TM50	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110430.1	CLASP2-205	7098	1472aa	ENSBTAP00000078888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6I3	-
ENSBTAT00000126144.1	CLASP2-206	7038	1452aa	ENSBTAP00000090712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZ66	-
ENSBTAT00000090126.1	CLASP2-202	6507	1294aa	ENSBTAP00000079255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAR2	-
ENSBTAT00000115053.1	CLASP2-201	6457	1304aa	ENSBTAP00000083156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SGX9	-
ENSBTAT00000015071.7	CLASP2-207	5663	1461aa	ENSBTAP00000015071.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BQ15	-

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Summary

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