Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SSBP1 ENSBTAG00000010931

.

Description

single stranded DNA binding protein 1 [Source:VGNC Symbol;Acc:VGNC:35307]

Location

Primary_assembly 4: 105,003,734-105,038,909 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 7 transcripts (splice variants) and 220 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117773.2	SSBP1-201	3136	226aa	ENSBTAP00000080775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SBD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000120807.2	SSBP1-206	3206	183aa	ENSBTAP00000074636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUM4	-
ENSBTAT00000014520.5	SSBP1-202	3149	168aa	ENSBTAP00000014520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N1S0	-
ENSBTAT00000141045.1	SSBP1-203	3126	148aa	ENSBTAP00000105713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000134347.2	SSBP1-205	1309	157aa	ENSBTAP00000095696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCB2	-
ENSBTAT00000102030.2	SSBP1-204	885	139aa	ENSBTAP00000075249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RVX3	-
ENSBTAT00000132074.1	SSBP1-207	441	146aa	ENSBTAP00000092556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T435	-

.

Summary

.

.