Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HTR4 ENSBTAG00000010837

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Description

5-hydroxytryptamine receptor 4 [Source:VGNC Symbol;Acc:VGNC:30000]

Location

Primary_assembly 7: 59,874,291-60,068,021 reverse strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000014383.5	HTR4-204	2976	402aa	ENSBTAP00000014383.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N3N9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000069905.2	HTR4-205	2934	388aa	ENSBTAP00000057054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LFQ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000071729.2	HTR4-201	2000	400aa	ENSBTAP00000067008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M158	-
ENSBTAT00000130269.1	HTR4-202	1249	378aa	ENSBTAP00000093703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAN8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067375.2	HTR4-203	1180	361aa	ENSBTAP00000072486.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MLD1	-

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Summary

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