Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DDX52 ENSBTAG00000010313

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Description

DExD-box helicase 52 [Source:VGNC Symbol;Acc:VGNC:27975]

Location

Primary_assembly 19: 13,899,961-13,922,657 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants), 195 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000013622.5	DDX52-201	2296	596aa	ENSBTAP00000013622.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5D7C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000090294.2	DDX52-202	2176	545aa	ENSBTAP00000085198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SML4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000089936.1	DDX52-203	2170	541aa	ENSBTAP00000081367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFX0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000128359.2	DDX52-204	1812	594aa	ENSBTAP00000080346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S8V4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000133546.1	DDX52-205	1772	584aa	ENSBTAP00000094428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TC55	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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