Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM9 ENSBTAG00000010103

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Description

tripartite motif containing 9 [Source:VGNC Symbol;Acc:VGNC:36353]

Location

Primary_assembly 10: 43,826,973-43,944,749 reverse strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 3 transcripts (splice variants), 200 orthologues and 73 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000045179.5	TRIM9-201	3390	795aa	ENSBTAP00000042592.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N068	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000013346.6	TRIM9-202	3135	710aa	ENSBTAP00000013346.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29RQ5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000076178.2	TRIM9-203	2375	673aa	ENSBTAP00000067644.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBI2	-

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Summary

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