Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL15A1 ENSBTAG00000010082

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Description

collagen type XV alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:27556]

Location

Primary_assembly 8: 63,974,773-64,078,125 forward strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 3 transcripts (splice variants), 174 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000013292.8	COL15A1-203	5049	1383aa	ENSBTAP00000013292.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MUC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000076073.3	COL15A1-201	5082	1372aa	ENSBTAP00000058394.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MUA3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000069136.3	COL15A1-202	5046	1360aa	ENSBTAP00000061962.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXM2	-

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Summary

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