Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: FAM53C ENSBTAG00000030529

.

Description

family with sequence similarity 53 member C [Source:VGNC Symbol;Acc:VGNC:28821]

Location

Primary_assembly 7: 49,736,530-49,748,474 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 3 transcripts (splice variants), 225 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000135120.2	FAM53C-201	2833	461aa	ENSBTAP00000093886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000013264.4	FAM53C-203	4065	392aa	ENSBTAP00000013264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29RM2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000131259.2	FAM53C-202	2692	414aa	ENSBTAP00000085740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRX3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.