Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGB3 ENSBTAG00000009987

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Description

integrin subunit beta 3 [Source:VGNC Symbol;Acc:VGNC:111905]

Location

Primary_assembly 19: 46,322,640-46,394,038 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 4 transcripts (splice variants), 267 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132154.2	ITGB3-202	7575	815aa	ENSBTAP00000087063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SL11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119028.2	ITGB3-204	7566	807aa	ENSBTAP00000102159.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TU76	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000128974.2	ITGB3-201	7497	809aa	ENSBTAP00000081695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCV8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000013173.6	ITGB3-203	6877	784aa	ENSBTAP00000013173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTN1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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