Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GARIN1B ENSBTAG00000009867

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Description

golgi associated RAB2 interactor 1B [Source:VGNC Symbol;Acc:VGNC:50157]

Gene Synonyms

FAM71F1

Location

Primary_assembly 4: 92,695,794-92,711,484 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 2 transcripts (splice variants), 107 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070029.2	GARIN1B-202	1138	362aa	ENSBTAP00000073841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000013015.5	GARIN1B-201	1688	343aa	ENSBTAP00000013015.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KIP3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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