Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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- GO: Anatomical entity
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Gene: RRP15 ENSBTAG00000009838

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Description

ribosomal RNA processing 15 homolog [Source:VGNC Symbol;Acc:VGNC:106904]

Location

Primary_assembly 16: 21,737,425-21,792,777 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 3 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118822.1	RRP15-203	1107	340aa	ENSBTAP00000103306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000012966.7	RRP15-201	3245	307aa	ENSBTAP00000012966.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YUJ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000090435.1	RRP15-202	1119	297aa	ENSBTAP00000096797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKK3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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