Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM1A ENSBTAG00000009500

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Description

lysine demethylase 1A [Source:VGNC Symbol;Acc:VGNC:30522]

Location

Primary_assembly 2: 129,769,257-129,836,280 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 7 transcripts (splice variants), 215 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000012501.7	KDM1A-201	3764	877aa	ENSBTAP00000012501.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000123321.1	KDM1A-202	3518	795aa	ENSBTAP00000088788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZI6	-
ENSBTAT00000075321.2	KDM1A-203	3506	791aa	ENSBTAP00000072403.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRF1	-
ENSBTAT00000131829.1	KDM1A-204	3449	772aa	ENSBTAP00000096084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TD89	-
ENSBTAT00000095704.1	KDM1A-205	3323	730aa	ENSBTAP00000103391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXK8	-
ENSBTAT00000132441.1	KDM1A-206	3188	685aa	ENSBTAP00000099363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLN5	-
ENSBTAT00000073016.2	KDM1A-207	3168	842aa	ENSBTAP00000070179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NET3	-

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Summary

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