Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG5 ENSBTAG00000009435

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Description

SMG5 nonsense mediated mRNA decay factor [Source:VGNC Symbol;Acc:VGNC:55683]

Location

Primary_assembly 3: 14,517,271-14,544,640 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000108087.2	SMG5-203	4099	991aa	ENSBTAP00000103684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000012415.7	SMG5-202	4882	918aa	ENSBTAP00000012415.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IFN9	-
ENSBTAT00000078123.3	SMG5-201	3217	933aa	ENSBTAP00000063171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N1Y1	-

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Summary

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