Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZC3H4 ENSBTAG00000009286

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Description

zinc finger CCCH-type containing 4 [Source:VGNC Symbol;Acc:VGNC:37106]

Location

Primary_assembly 18: 54,112,969-54,150,109 reverse strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 5 transcripts (splice variants), 196 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000093765.1	ZC3H4-205	4245	1316aa	ENSBTAP00000089041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SY77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000105115.1	ZC3H4-201	4902	1233aa	ENSBTAP00000084921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SPS2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000125364.1	ZC3H4-202	4863	1220aa	ENSBTAP00000084349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNC8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000099555.1	ZC3H4-204	4174	1263aa	ENSBTAP00000093481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TA30	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000012237.6	ZC3H4-203	4066	1276aa	ENSBTAP00000012237.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BHZ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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