Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
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Gene: U2SURP ENSBTAG00000009154

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Description

U2 snRNP associated SURP domain containing [Source:VGNC Symbol;Acc:VGNC:36557]

Location

Primary_assembly 1: 125,936,272-125,986,606 reverse strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 2 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000088655.1	U2SURP-201	4112	1029aa	ENSBTAP00000087439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SW45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000012063.6	U2SURP-202	3935	970aa	ENSBTAP00000012063.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MHP1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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