Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Gene: POLR3F ENSBTAG00000008825

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Description

RNA polymerase III subunit F [Source:VGNC Symbol;Acc:VGNC:33150]

Location

Primary_assembly 13: 38,533,471-38,546,652 forward strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 5 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000091015.2	POLR3F-205	1825	323aa	ENSBTAP00000078646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S0Z5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000011619.7	POLR3F-202	1839	316aa	ENSBTAP00000011619.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MYX7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000115349.1	POLR3F-203	1695	268aa	ENSBTAP00000101167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TUX1	-
ENSBTAT00000133668.2	POLR3F-204	869	259aa	ENSBTAP00000078202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7S5	-
ENSBTAT00000134687.1	POLR3F-201	625	168aa	ENSBTAP00000091840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T283	-

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Summary

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